biofisherman
I am a biology scientist who is learning bioinformatics.
University of Wisconsin-MadisonPhiladelphia, Pennsylvania
Pinned Repositories
bds-files
Supplementary files for my book, "Bioinformatics Data Skills"
Bioinformatics_resources
resources collected from internet
clipper
A tool to identify CLIP-seq peaks
FusReplication
Materials for FUS replication paper 2020
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
HistoneMapping
Comprehensive mapping of histone modifications at DNA Double Strand Breaks deciphers repair pathway chromatin signatures.
Intro-to-rnaseq-hpc-gt
Introduction to RNA-seq using HPC
PICsnATAC
Paired Insertion Counting for snATAC-seq data
pyGenomeTracks
python module to plot beautiful and highly customizable genome browser tracks
trackViewer
A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
biofisherman's Repositories
biofisherman/bds-files
Supplementary files for my book, "Bioinformatics Data Skills"
biofisherman/Bioinformatics_resources
resources collected from internet
biofisherman/clipper
A tool to identify CLIP-seq peaks
biofisherman/FusReplication
Materials for FUS replication paper 2020
biofisherman/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
biofisherman/HistoneMapping
Comprehensive mapping of histone modifications at DNA Double Strand Breaks deciphers repair pathway chromatin signatures.
biofisherman/Intro-to-rnaseq-hpc-gt
Introduction to RNA-seq using HPC
biofisherman/PICsnATAC
Paired Insertion Counting for snATAC-seq data
biofisherman/pyGenomeTracks
python module to plot beautiful and highly customizable genome browser tracks
biofisherman/RMEJLBASBMP_2024
Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"
biofisherman/rtl8812au
Realtek 802.11n WLAN Adapter Linux driver
biofisherman/scRNA.seq.course
Analysis of single cell RNA-seq data course
biofisherman/scRNAseq-analysis-notes
scRNAseq analysis notes from Ming Tang
biofisherman/single-cell-best-practices
https://www.sc-best-practices.org
biofisherman/single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
biofisherman/superheat
An r package for generating beautiful and customizable heatmaps