bioinfo-dirty-jobs

Pinned Repositories

bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Language:Python1 2 00
jbrowse
slowkow's personal branch of A modern genome browser in JavaScript
Language:JavaScript1 2 00
master_course
tutorial
Language:CSS1 2 01
mutsig_workflow
ga4gh, oncotator, mutsig
Language:Python10
ngs-filters
Filters for false-positive mutation calls in NGS
Language:R1 2 00
NGSBASE
Tutorial test
Language:HTML1 2 01
orchid
A novel management, annotation, and machine learning framework for analyzing cancer mutations
Language:Jupyter Notebook1 2 00
pirateplotr
[project] ushahidi project mgmt gantt for pirates to plot projects
Language:HTML1 2 00
pythonPackageLesson
1 2 00
Thebasics
https://bioinfo-dirty-jobs.github.io/Thebasics/
Language:HTML3 2 11

bioinfo-dirty-jobs's Repositories

bioinfo-dirty-jobs/Thebasics
https://bioinfo-dirty-jobs.github.io/Thebasics/
Language:HTML3 2 11
bioinfo-dirty-jobs/jbrowse
slowkow's personal branch of A modern genome browser in JavaScript
Language:JavaScript1 2 00
bioinfo-dirty-jobs/ngs-filters
Filters for false-positive mutation calls in NGS
Language:R1 2 00
bioinfo-dirty-jobs/100-Days-Of-ML-Code
100 Days of ML Coding
bioinfo-dirty-jobs/Balzac-for-Jekyll
Your favorite AnchorCMS theme, now for Jekyll!
Language:CSS
bioinfo-dirty-jobs/bcbio_validation_workflows
A community menagarie of automated variant validations using bcbio and the Common Workflow Language
Language:Common Workflow Language2 0
bioinfo-dirty-jobs/bcbio_validations
Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses
Language:HTML
bioinfo-dirty-jobs/Data
Language:Nextflow
bioinfo-dirty-jobs/docker-containers
Offers 3 different flavors of docker containers that can be built upon to deploy Drupal and Tripal sites.
Language:Dockerfile
bioinfo-dirty-jobs/ideal
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
Language:R
bioinfo-dirty-jobs/igv.js
Embeddable genomic visualization component based on the Integrative Genomics Viewer
Language:JavaScript
bioinfo-dirty-jobs/keras
Deep Learning for humans
Language:Python
bioinfo-dirty-jobs/MailHog
Web and API based SMTP testing
Language:Go
bioinfo-dirty-jobs/oncotator_singularity
oncotator singularity
2 01
bioinfo-dirty-jobs/online-cv
Online CV
Language:CSS
bioinfo-dirty-jobs/pgkb-ngs-pipeline
PharmGKB NGS Pipeline
bioinfo-dirty-jobs/quality
Language:HTML
bioinfo-dirty-jobs/redcap-docker-compose
A docker-compose script for building REDCap with Mailhog
Language:PHP
bioinfo-dirty-jobs/rmarkdown-book
R Markdown: The Definitive Guide (to be published soon)
Language:TeX
bioinfo-dirty-jobs/rmdshower
R Markdown template for shower
Language:R
bioinfo-dirty-jobs/RNA-seq-analysis
RNAseq analysis notes from Ming Tang
Language:Python
bioinfo-dirty-jobs/SMILES-enumeration
SMILES enumeration for QSAR modelling using LSTM recurrent neural networks
bioinfo-dirty-jobs/tcga_subtype_classification
Detecting cancer subtypes with machine learning.
Language:Jupyter Notebook2 0
bioinfo-dirty-jobs/test_1000
test_1000
bioinfo-dirty-jobs/test_out
Language:HTML
bioinfo-dirty-jobs/Testing_tdendogram
Language:HTML2 0
bioinfo-dirty-jobs/tutorials
A repository for tutorials I have linked to my website
Language:HTML
bioinfo-dirty-jobs/Typesetter
Open source CMS written in PHP focused on ease of use with true WYSIWYG editing and flat-file storage.
Language:PHP
bioinfo-dirty-jobs/un-cnvc
A fast way to call copy number variants from SNP callsets
Language:R
bioinfo-dirty-jobs/Zika-RNAseq-Pipeline
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study
Language:Jupyter Notebook