bioinfo-ut/PlasmidSeeker

Issues

• P.values not included in output

  #30 opened 5 months ago by samhimes92
  0

• nothing found on a metagenome search?

  #29 opened 7 months ago by Sung-hub
  0

• Issue with "names.txt missing! at plasmidseeker.pl line 264."

  #28 opened 2 years ago by RightCake1
  2

• results explanation and report

  #27 opened 3 years ago by aslangabriel
  0

• multiple hits for plasmid description in NCBI

  #26 opened 3 years ago by waalkes
  2

• Error: Creating the wordmap failed! Died at plasmidseeker.pl line 156

  #25 opened 3 years ago by ABMolBio
  5

• Plasmid names file .../PlasmidSeeker-master/PlasmidSeeker_DB/db_w20_fna/names.txt missing! at plasmidseeker.pl line 264.

  #24 opened 4 years ago by ilkaybuysal
  5

• GIves error about GenomeTester4/glistmaker exists but it's a binary file so i cant see what's in it.

  #23 opened 4 years ago by ilkaybuysal
  3

• Deciding  -b [close reference bacterium FASTA file]

  #22 opened 4 years ago by ilkaybuysal
  2

• -i [your WGS sample FASTQ file], is it paired or unpaired fastq file?

  #21 opened 4 years ago by ilkaybuysal
  4

• gt4_wordmap_new: invalid file size (1048576, should be 1429612) Error: Creating the wordmap failed!

  #19 opened 5 years ago by Galib009
  1

• Test

  #20 opened 5 years ago by NetPunyawee
  0

• how can I obtain the fasta file sequence for the 8514 plasmid ?

  #16 opened 6 years ago by kjestradag
  4

• compressed gz file support

  #18 opened 6 years ago by LeonardosMageiros
  1

• Plasmid Seeker interpretation?

  #17 opened 6 years ago by el-nino-007
  1

• Clarification on the reference strain used

  #14 opened 6 years ago by LeonardosMageiros
  4

• there is some way to get the reads that belong to the plasmids..

  #15 opened 6 years ago by kjestradag
  1

• Execute plasmidseeker in multiple input files - output folder flag

  #12 opened 6 years ago by LeonardosMageiros
  6

• High P value plasmids clarification

  #10 opened 6 years ago by LeonardosMageiros
  14

• Error with gt4_wordmap_new

  #6 opened 6 years ago by nickp60
  7

• Paired-end reads?

  #8 opened 6 years ago by apredeus
  1

• Cannot open GenomeTester binaries

  #9 opened 6 years ago by pavlo888
  1

• Please add release tags

  #7 opened 6 years ago by tillea
  2

• cannot execute binary file

  #4 opened 6 years ago by nonghor
  3

• Can't exec "GenomeTester4/glistmaker":

  #5 opened 6 years ago by SK-N-BE
  1

• Plasmid present in database?

  #3 opened 7 years ago by SK-N-BE
  5

• Illegal division by zero at plasmidseeker.pl line 409

  #1 opened 7 years ago by danknight
  7

• #! /usr/bin/perl line not present

  #2 opened 7 years ago by Shabhonam
  1