Dump final HBV, paths and GFAs consistently
Opened this issue · 2 comments
bjclavijo commented
All needs to check out with the fasta representation.
bjclavijo commented
On the appropriate GFAs, represent gaps with empty sequences, as in SDG.
ljyanesm commented
Sequences are now written in lexicographically canonical orientations (compatible with SDG). Gaps for empty sequences are not yet represented in the GFA output.