Pinned Repositories
satsuma2
FFT cross-correlation based synteny aligner, (re)designed to make full use of parallel computing
sdg
Sequence Distance Graph framework: graph + reads + mapping + analysis
skm-tools
Skip-mer tools
w2rap
WGS (Wheat) Robust Assembly Pipeline
w2rap-contigger
An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.
bioinfologics.github.io
bsg_scripts
octoploid_dev
nextclip
Nextera Long Mate Pair analysis and processing tool
KAT
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.