Pinned Repositories
BIcenter
A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.
COEUS
COEUS: Semantic Web Application Framework
dicoogle
Dicoogle - Open Source PACS
dicoogle-learning-pack
Resources for users and developers of Dicoogle
dicoogle-plugin-sample
Dicoogle Plugin - Sample
GenericCDSS
GenericCDSS is a web-based application, which provides the main dashboard where professionals (e.g, practitioners, nurses) can follow all the patients that are under their responsibility and some details about the state of each one.
gimli
Gimli is now part of Neji.
PatientTM
Patient trajectory modeling solution for clinical outcome prediction
scaleus
Semantic Web Services Integration for Biomedical Applications
taska
Workflow Management for Biomedical exploration
UA.PT Bioinformatics's Repositories
bioinformatics-ua/dicoogle
Dicoogle - Open Source PACS
bioinformatics-ua/dicoogle-learning-pack
Resources for users and developers of Dicoogle
bioinformatics-ua/dicoogle-plugin-sample
Dicoogle Plugin - Sample
bioinformatics-ua/biocreativeVII_track2
BioCreative VII NLM-Chem track: full-text chemical identification and indexing in PubMed articles
bioinformatics-ua/dicoogle-client-js
Dicoogle Client - Javascript
bioinformatics-ua/PatientTM
Patient trajectory modeling solution for clinical outcome prediction
bioinformatics-ua/polus
bioinformatics-ua/BIcenter-AD
A web solution to harmonise different Alzheimer's Disease cohorts into a standard data schema, using ETL processes in a multi-institution environment.
bioinformatics-ua/midas
MIDAS is a multi-framework DataLoader that can be leverage to produce highly efficient data pipelines
bioinformatics-ua/GDI_Pipeline
A Pipeline for comparing GATK and Deepvariant
bioinformatics-ua/MicroGES
R solution to identify gene expression signatures in microarray datasets
bioinformatics-ua/BioASQ
Deep architectures for biomedical question answering
bioinformatics-ua/BioKBQA
BioKBQA - Biomedical Knowledge Base Question Answering
bioinformatics-ua/COMPACT
Compressor Benchmark Taxonomic Classification
bioinformatics-ua/incubator-superset
Apache Superset (incubating) is a modern, enterprise-ready business intelligence web application
bioinformatics-ua/SecureFASTA
Tool for encrypt and decrypt fasta files to be send in a insecure communication channel
bioinformatics-ua/ArcadeBattle
Serious games for hand arthritis rehabilitation
bioinformatics-ua/BioAnswer
BioAnswer
bioinformatics-ua/biodata-starter-kit-se-deployment-notes
Documentation of deployment of the GDI starter kit in Portuguese node
bioinformatics-ua/GeoDropdown.js
Geo Dropdown component for javascript
bioinformatics-ua/KNOWLAM
bioinformatics-ua/PEI-detector-models
A list of models capable of detect computed-generated text from human
bioinformatics-ua/PrivacyCDM
Privacy preserving techniques applied to OMOP CDM
bioinformatics-ua/scaleus-fair
bioinformatics-ua/BioASQ-10
bioinformatics-ua/Diseasecard
Rare Diseases Portal using COEUS framework
bioinformatics-ua/HealthDBFinder
bioinformatics-ua/montra2
Montra 2.0: An scalable architecture for profiling distributed databases
bioinformatics-ua/PatientFM
Patient Family History extraction tool
bioinformatics-ua/xgTaxonomy