UA.PT Bioinformatics

IEETA, University of Aveiro, Aveiro, Portugal

Pinned Repositories

BIcenter
A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.
Language:JavaScript16 5 72
COEUS
COEUS: Semantic Web Application Framework
Language:Java22 8 274
dicoogle
Dicoogle - Open Source PACS
Language:Java465 38 259136
dicoogle-learning-pack
Resources for users and developers of Dicoogle
Language:SCSS18 4 175
dicoogle-plugin-sample
Dicoogle Plugin - Sample
Language:Java10 7 312
GenericCDSS
GenericCDSS is a web-based application, which provides the main dashboard where professionals (e.g, practitioners, nurses) can follow all the patients that are under their responsibility and some details about the state of each one.
Language:Python41 9 010
gimli
Gimli is now part of Neji.
14 17 76
PatientTM
Patient trajectory modeling solution for clinical outcome prediction
Language:Python8 4 02
scaleus
Semantic Web Services Integration for Biomedical Applications
Language:JavaScript12 11 63
taska
Workflow Management for Biomedical exploration
Language:JavaScript30 9 07

UA.PT Bioinformatics's Repositories

bioinformatics-ua/COEUS
COEUS: Semantic Web Application Framework
Language:Java22 8 274
bioinformatics-ua/gimli
Gimli is now part of Neji.
14 17 76
bioinformatics-ua/scaleus
Semantic Web Services Integration for Biomedical Applications
Language:JavaScript12 11 63
bioinformatics-ua/montra
Public release of Montra (previously called Catalogue). EMIF Catalogue is backed by Montra.
Language:JavaScript7 16 12
bioinformatics-ua/neji
Flexible, easy and powerfull framework for faster biomedical concept recognition.
6 17 33
bioinformatics-ua/trigner
Trigger recognition for event mining.
Language:Java4 16 01
bioinformatics-ua/ann2rdf
Semantic layer to convert multiple annotations files into RDF data
Language:Python2 19 01
bioinformatics-ua/Eugene
EuGene is a synthetic gene redesign software.
Language:Java2 9 0
bioinformatics-ua/jdicomanonymizer
Application to anonymize DICOM files. It can be used as a standalone application or library
Language:Java2 5 0
bioinformatics-ua/mRNA-Optimiser
Console application to redesign mRNA nucleotide sequences (given as text strings) to enhance its secondary structure in terms of minimum free energy
Language:Java2 10 02
bioinformatics-ua/PPSE
Posterior Playfair Searchable Encryption (PPSE)
Language:Java2 4 01
bioinformatics-ua/becas-python
becas API client for Python.
Language:Python1 15 01
bioinformatics-ua/coeus-python
COEUS Python Client
Language:Python1 3 00
bioinformatics-ua/dicoogle-couchdb-plugin
Dicoogle CouchDB Plugin
Language:Java1 9 0
bioinformatics-ua/dicoogle-mongo-plugin
Mongo DB Plugin for Dicoogle. It uses the MongoDB to File Storage and also for query.
Language:Java1 8 04
bioinformatics-ua/i2x-client
i2x client agent
Language:JavaScript1 12 0
bioinformatics-ua/jquery-booleanquerywidget
It is a jquery plugin to build boolean queries in javascript
Language:JavaScript1 17 0
bioinformatics-ua/scaleus-python
SCALEUS Python Client
Language:Python1 5 01
bioinformatics-ua/WAVe
Web Analysis of the Variome
Language:Groff1 3 0
bioinformatics-ua/AchillesWeb
Interactive web site for reviewing the results of the Achilles R package.
Language:JavaScript15 0
bioinformatics-ua/becas-widget
Biomedical Concept Annotator and Highlighter
bioinformatics-ua/coeus-gem
COEUS Ruby gem
Language:Ruby3 0
bioinformatics-ua/dicom-template-rules
DICOM Template Rules
Language:Java15 0
bioinformatics-ua/django-download-manager
Django Download manager - by request
Language:HTML7 0
bioinformatics-ua/i2x-gem
i2x gem
Language:Ruby12 0
bioinformatics-ua/imageio-ext
Additional plugins and extension for the standard Java ImageIO library
Language:Java6 0
bioinformatics-ua/johnny-cache
johnny cache django caching framework
Language:Python6 0
bioinformatics-ua/jquery-dyndropdown
jQuery Dynamic Drop down with Selection
Language:JavaScript20 0
bioinformatics-ua/jsMapsAPI
Javascript Vectorial Map Wrapper
Language:JavaScript16 22
bioinformatics-ua/NERO
Name Entity Recognition Optimizer
Language:Java13 01