VC with bionode-ncbi+tools (bash) with filtering
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thejmazz commented
@bmpvieira do you want to add basic filtering? or maybe give some tips/hints and I can try to add it myself. otherwise today I am going to compile my notes from the 4 papers and start playing with nextflow/snakemake if the filter stuff is not ready yet. also I think reading nextflow/snakemake might be better use of time today then experimenting myself with filtering
- filter with khmer
- filter with kmc
thejmazz commented