bionode

Modular and universal bioinformatics

The Internet

Pinned Repositories

bionode
Modular and universal bioinformatics
Language:JavaScript312 36 3439
bionode-bwa
A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).
Language:JavaScript7 25 13
bionode-examples
Bionode usage example files
Language:JavaScript6 23 01
bionode-fasta
Streamable FASTA parser.
Language:JavaScript14 23 59
bionode-go
Gene Ontology in Bionode (WIP)
Language:JavaScript7 23 03
bionode-ncbi
Node.js module for working with the NCBI API (aka e-utils).
Language:JavaScript65 24 2520
bionode-seq
Module for DNA, RNA and protein sequences manipulation
Language:JavaScript10 22 55
bionode-template
A base template for quickly creating bionode modules.
Language:JavaScript8 23 14
bionode-watermill
💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine
Language:JavaScript37 19 6611
fasta-parser
Buffer Stream parser from FASTA to JSON.
Language:JavaScript6 22 14

bionode's Repositories

bionode/bionode
Modular and universal bioinformatics
Language:JavaScript312 36 3439
bionode/bionode-ncbi
Node.js module for working with the NCBI API (aka e-utils).
Language:JavaScript65 24 2520
bionode/bionode-watermill
💧Bionode-Watermill: A (Not Yet Streaming) Workflow Engine
Language:JavaScript37 19 6611
bionode/bionode-fasta
Streamable FASTA parser.
Language:JavaScript14 23 59
bionode/bionode-seq
Module for DNA, RNA and protein sequences manipulation
Language:JavaScript10 22 55
bionode/bionode-bwa
A Node.js wrapper for the Burrow-Wheeler Aligner (BWA).
Language:JavaScript7 25 13
bionode/bionode-go
Gene Ontology in Bionode (WIP)
Language:JavaScript7 23 03
bionode/bionode-examples
Bionode usage example files
Language:JavaScript6 23 01
bionode/bionode-sra
Node.js wrapper for SRA Toolkit
Language:JavaScript6 21 53
bionode/fasta-parser
Buffer Stream parser from FASTA to JSON.
Language:JavaScript6 22 14
bionode/biohacker
A nodeschool workshop that gives some usage examples of bionode for bioinformatics
Language:JavaScript5 21 22
bionode/bionode-sam
Node.js wrapper for samtools.
Language:JavaScript5 21 44
bionode/bionode-vcf
vcf parser using javascript
Language:JavaScript5 19 87
bionode/bionode-gff
GFF parser
Language:JavaScript3 16 23
bionode/bionode-obo
Streaming OBO 1.2 Parser
Language:JavaScript3 19 254
bionode/bionode-fastq
Streamable FASTQ parser
Language:JavaScript2 20 44
bionode/bionode.io
Bionode website
Language:HTML2 19 54
bionode/bionode-blast
NodeJS API wrapping the NCBI BLAST Common URL API. WIP.
Language:JavaScript1 20 13
bionode/bionode-quickgo
Acess EBI QuickGO REST API with promises and streams.
Language:JavaScript1 20 22
bionode/bionode-watermill-tutorial
This is a tutorial for bionode-watermill
Language:JavaScript1 3 33
bionode/biopkgs
Custom Nix packages not yet available on NixOS/nixpkgs
Language:Nix1 2 02
bionode/github-project-public
Make GitHub project board visible to non members
Language:CSS1 19 211
bionode/timeline
[project] gantt chart for msl
Language:JavaScript1 2 11
bionode/bioflow
2 0
bionode/bionode-scripts
Random useful scripts
Language:JavaScript18 22
bionode/cocalc-docker
Docker setup for running CoCalc as downloadable software on your own computer
Language:Dockerfile1 01
bionode/doc.bionode.io
Beautiful static documentation for your API
Language:JavaScript2 04
bionode/events
Gather together a group to skill-share, co-work, and create community
Language:JavaScript18 21
bionode/GSoC17
GSoC Project: Streaming Workflow Engine
Language:JavaScript3 25
bionode/gsoc18
Language:JavaScript9 01