Pinned Repositories
atac-seq-pipeline
ATAC-seq analysis pipeline
MachineLearning
Machine Learning in Action（机器学习实战-笔记）
snapseed
wilcoxauc
A fast Wilcoxon rank sum test and auROC analysis python package for single cell RNA-seq
wordle_solver
YOGA920-Hackintosh
HEOCA
sc2heoca
A method to map new scRNA-seq data to HEOCA
ANANSE
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
seq2science
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
bioqxu's Repositories
bioqxu/YOGA920-Hackintosh
bioqxu/wilcoxauc
A fast Wilcoxon rank sum test and auROC analysis python package for single cell RNA-seq
bioqxu/MachineLearning
Machine Learning in Action（机器学习实战-笔记）
bioqxu/wordle_solver
bioqxu/atac-seq-pipeline
ATAC-seq analysis pipeline
bioqxu/bcbb
Incubator for useful bioinformatics code, primarily in Python and R
bioqxu/bioqxu.github.io
bioqxu/blogs
Links to data science, bioinformatics, statistics, and machine learning resources
bioqxu/deeplearningbook-chinese
Deep Learning Book Chinese Translation
bioqxu/snapseed
bioqxu/geek-vim
bioqxu/genomepy
Download genomes the easy way.
bioqxu/gimmemotifs
Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.
bioqxu/gog
在线代理谷歌
bioqxu/PANANSE
bioqxu/scbrowser
bioqxu/seurat-wrappers
Community-provided extensions to Seurat
bioqxu/snakepipes
A toolkit based on snakemake and python for analysis of NGS data
bioqxu/STAR
RNA-seq aligner
bioqxu/tetris_game
A Tetris Game with AI
bioqxu/TheEconomist
经济学人Markdown版2019年文章，每周五更新.2020文章请前往https://github.com/fredliu168/TheEconomist2020
bioqxu/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
bioqxu/workshop-scRNAseq
Single cell RNA sequencing analysis course