biosimulators/Biosimulators_COPASI

Apply new KISAO terms for algorithms and parameters

jonrkarr opened this issue · 2 comments

jonrkarr commented
  • Replace KISAO_0000088 --> KISAO_0000560 new KISAO id for LSODA/LSODAR
  • Replace KISAO_0000483 --> KISAO_0000559 new KISAO id for initial step size
  • Replace KISAO_0000231 --> KISAO_0000561 new KISAO id for hybrid-runge-kutta method
  • Replace KISAO_0000231 --> KISAO_0000562 new KISAO id for hybrid-lsoda method
  • Replace KISAO_0000231 --> KISAO_0000563 new KISAO id for hybrid-rk45 method
  • Replace KISAO_0000036 --> KISAO_0000566 new KISAO id for Stochastic second order Runge-Kutta Method
  • Replace KISAO_0000243 --> KISAO_0000567 new KISAO id for force physical correctness parameter
  • Replace KISAO_0000242 --> KISAO_0000565 new KISAO id for Absolute tolerance for root finding
jonrkarr commented

Update in dev-kisao branch.

  • Can merge once the new terms are incorporated into KISAO.
jonrkarr commented

Done