Pinned Repositories
beast2
Bayesian Evolutionary Analysis by Sampling Trees
BFD_snapper_tutorial
bjoelle.github.io
Personal page of Joëlle Barido-Sottani, built from the academicpages template.
CBAN
releases of beast2 packaged zip files in a reliable location
ClaDS-tutorial
Tutorial on the ClaDS package for the Taming the BEAST website
DisparityBias
EvoPhylo
A package to perform automated morphological character partitioning for phylogenetic analyses and analyze macroevolutionary parameter outputs from clock (time-calibrated) Bayesian inference analyses.
FBD-tutorial
Dating Species Divergences with the Fossilized Birth-Death Process
FossilSim_SI
Supplementary materials for "FossilSim: an R package for simulating fossil occurrence data under mechanistic models of preservation and recovery"
mariage_hj
bjoelle's Repositories
bjoelle/beast2
Bayesian Evolutionary Analysis by Sampling Trees
bjoelle/BFD_snapper_tutorial
bjoelle/bjoelle.github.io
Personal page of Joëlle Barido-Sottani, built from the academicpages template.
bjoelle/CBAN
releases of beast2 packaged zip files in a reliable location
bjoelle/ClaDS-tutorial
Tutorial on the ClaDS package for the Taming the BEAST website
bjoelle/DisparityBias
bjoelle/EvoPhylo
A package to perform automated morphological character partitioning for phylogenetic analyses and analyze macroevolutionary parameter outputs from clock (time-calibrated) Bayesian inference analyses.
bjoelle/FBD-tutorial
Dating Species Divergences with the Fossilized Birth-Death Process
bjoelle/FossilSim_SI
Supplementary materials for "FossilSim: an R package for simulating fossil occurrence data under mechanistic models of preservation and recovery"
bjoelle/mariage_hj
bjoelle/MSBD-tutorial
bjoelle/Poorly_dated_fossils_SI
Supplementary materials for "Estimating the age of poorly dated fossil specimens and deposits using a total-evidence approach and the fossilized birth-death process".
bjoelle/revbayes
bjoelle/sampled-ancestors
This BEAST2 package provides MCMC proposals and post-processing tools for sampling trees containing sampled ancestors
bjoelle/stratigraphic_age_uncertainty_SI
Supplementary materials for "Ignoring stratigraphic age uncertainty leads to erroneous estimates of species divergence times under the fossilized birth-death process"
bjoelle/Substitution-model-averaging
A tutorial using bModelTest
bjoelle/tree_inference_age_uncertainty_SI
bjoelle/tutorial_troubleshooting
Post-processing and improving performance