bjornwallner

Pinned Repositories

AF_flex
Language:HTML0 2 00
alphafold
Language:Python0 2 00
alphafoldv2.2.0
Open source code for AlphaFold.
Language:Python35 2 06
alphafoldv2.3.0
Language:Python1 2 01
DockQ
DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
Language:Python218 8 3550
ML_medbioinfo
Machine Learning in Medical Bioinformatics
Language:Jupyter Notebook21 5 319
Pcons
Protein Structure Consensus
Language:C1 2 02
ProQ_scripts
Language:Perl41
ProQDock
ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support Vector Regression algorithm. The current version has 13 features: both all-atom and interface features. ProQDock should also serve to develop hybrid methods in future attempts to solve this 'hard' problem.
Language:C++9 3 25
proteus
Proteus is a Random Forrest based classifier to predict the 'disorder-to-order' transitioning binding residues (called 'protean') given the protein sequence
Language:HTML20

bjornwallner's Repositories

bjornwallner/DockQ
DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
Language:Python218 8 3550
bjornwallner/alphafoldv2.2.0
Open source code for AlphaFold.
Language:Python35 2 06
bjornwallner/ML_medbioinfo
Machine Learning in Medical Bioinformatics
Language:Jupyter Notebook21 5 319
bjornwallner/ProQDock
ProQDock is a Protein-Protein docking scoring program that uses high level coordinate driven features compiled and trained by a Support Vector Regression algorithm. The current version has 13 features: both all-atom and interface features. ProQDock should also serve to develop hybrid methods in future attempts to solve this 'hard' problem.
Language:C++9 3 25
bjornwallner/ProQ_scripts
Language:Perl41
bjornwallner/proteus
Proteus is a Random Forrest based classifier to predict the 'disorder-to-order' transitioning binding residues (called 'protean') given the protein sequence
Language:HTML20
bjornwallner/alphafoldv2.3.0
Language:Python1 2 01
bjornwallner/Pcons
Protein Structure Consensus
Language:C1 2 02
bjornwallner/AF_flex
Language:HTML0 2 00
bjornwallner/alphafold
Language:Python0 2 00
bjornwallner/alphafoldv2.1.0
Language:Python2 0
bjornwallner/dgram2dmap
Converts AlphaFold distograms into distance matrices and saves them into a number of formats
Language:Python
bjornwallner/EDTsurf
Added functionality to EDTsurf
Language:C++
bjornwallner/exjobb
Language:HTML2 0
bjornwallner/ML_from_kaggle
Language:Jupyter Notebook
bjornwallner/ML_workshop
Workshop in Machine Learning for the The Swedish National Graduate School in Medical Bioinformatics
bjornwallner/pdb_codes
Language:BitBake2 0
bjornwallner/ph
Language:Perl
bjornwallner/proq2-server
ProQ2 web server
Language:Perl2 0
bjornwallner/scripts
various scripts that might be useful
Language:Python
bjornwallner/slurm_scripts
A bunch of useful tools to interact with slurm
Language:Shell2 0
bjornwallner/TFTB46
2 0
bjornwallner/tmp
bjornwallner/tmp2
2 0
bjornwallner/wiki
Language:HTML2 0
bjornwallner/wordom
Language:Python2 01