Pinned Repositories
3d-mri-brain-tumor-segmentation-using-autoencoder-regularization
Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).
bids-qsiprep
brainstorm3
Brainstorm software: MEG, EEG, fNIRS, ECoG, sEEG and electrophysiology
datasciencecoursera
datasharing
The Leek group guide to data sharing
DiffusionImagingTK
This is a module for ITK: The Insight Toolkit for Segmentation and Registration. It is designed to work with the ITKv4 modular system and to be places it ITK/Modules/External or uses as a Remote module. This modular is a collection of tools written to allow for analysis of diffusion weighted magnetic resonance imaging (DW-MRI / DWI).
dipy
Diffusion MR Imaging in Python
docker-opengl
Multi-Arch Docker - Mesa 3D OpenGL Software Rendering (Gallium) - LLVMpipe, and OpenSWR Drivers
itkSpatialObjectWriters
collections of classes useful for writing / convertering ITK spatial objects to other formats
bloyl's Repositories
bloyl/DiffusionImagingTK
This is a module for ITK: The Insight Toolkit for Segmentation and Registration. It is designed to work with the ITKv4 modular system and to be places it ITK/Modules/External or uses as a Remote module. This modular is a collection of tools written to allow for analysis of diffusion weighted magnetic resonance imaging (DW-MRI / DWI).
bloyl/itkSpatialObjectWriters
collections of classes useful for writing / convertering ITK spatial objects to other formats
bloyl/3d-mri-brain-tumor-segmentation-using-autoencoder-regularization
Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).
bloyl/bids-qsiprep
bloyl/brainstorm3
Brainstorm software: MEG, EEG, fNIRS, ECoG, sEEG and electrophysiology
bloyl/datasciencecoursera
bloyl/datasharing
The Leek group guide to data sharing
bloyl/dipy
Diffusion MR Imaging in Python
bloyl/docker-opengl
Multi-Arch Docker - Mesa 3D OpenGL Software Rendering (Gallium) - LLVMpipe, and OpenSWR Drivers
bloyl/FID-A
Toolbox for simulation and processing of in-vivo magnetic resonance spectroscopy (MRS) data
bloyl/fieldtrip
The MATLAB software toolbox for MEG and EEG analysis
bloyl/fsl_mrs
Mirror of the FSL-MRS gitlab repository
bloyl/fw-heudiconv
Heuristic-based Data Curation on Flywheel
bloyl/Gannet2.0
bloyl/hnn
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
bloyl/hnn-core
Simulation and optimization of neural circuits for MEG/EEG source estimates
bloyl/ipyvtk-simple
minimal ipywidget to interface with any Python vtkRenderWindow
bloyl/itkBuildExternalModule
An example Cmake structure to show how to include External ITK modules in a project by building them outside of the ITK source tree.
bloyl/MegNET_2020
This project contains code for the manuscript "MEGnet: Automatic ICA-Based Artifact Removal for MEG using Spatiotemporal Convolutional Neural Networks".
bloyl/mne-bids
MNE-BIDS
bloyl/mne-docker
Repository for mne docker images
bloyl/mne-python
MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
bloyl/mne-realtime
Realtime data analysis with MNE-Python
bloyl/mne-testing-data
Data for mne-python testing
bloyl/mne_docker
bloyl/nipype
Workflows and interfaces for neuroimaging packages
bloyl/osprey
All-in-one toolbox for processing of magnetic resonance spectroscopy data.
bloyl/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
bloyl/scikit-kinematics
Python functions for working with 3D kinematics.
bloyl/spec2nii
Multi-format in vivo MR spectroscopy conversion to NIFTI