bmill3r

ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

ads1-slides

Slides for Algorithms for DNA Sequencing Coursera class

Bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

bmill3r.github.io

personal website 2.0

cmdb-bootcamp-homework

Homework for Comp. Bio. Bootcamp 9/2/14-9/5/14

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

data_cv

Generate custom CV using R and CSS based on `datadrivencv`

EpiClass

Optimizing and predicting performance of DNA methylation biomarkers using sequence methylation density information.

MERINGUE

spatial gene expression analysis in non-homogenous tissues

STdeconvolve

Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data

bmill3r/EpiClass

Optimizing and predicting performance of DNA methylation biomarkers using sequence methylation density information.

bmill3r/courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

bmill3r/data_cv

Generate custom CV using R and CSS based on `datadrivencv`

bmill3r/ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

bmill3r/ads1-slides

Slides for Algorithms for DNA Sequencing Coursera class

bmill3r/Bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

bmill3r/bmill3r.github.io

personal website 2.0

bmill3r/cmdb-bootcamp-homework

Homework for Comp. Bio. Bootcamp 9/2/14-9/5/14

bmill3r/MERINGUE

spatial gene expression analysis in non-homogenous tissues

bmill3r/cwltool

Common Workflow Language reference implementation

bmill3r/data-science-ipython-notebooks

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.

bmill3r/DataScienceSpecialization.github.io

http://DataScienceSpecialization.github.io

bmill3r/flexible-jekyll

Flexible-Jekyll is a simple and clean theme for Jekyll

bmill3r/JaneliaMLCourse

Janelia machine learning course resources

bmill3r/JaneliaMLCourse-1

bmill3r/jean.fan

https://jean.fan

bmill3r/JEFworks.github.io

bmill3r/jekyll-theme-prologue

A Jekyll version of the "Prologue" theme by HTML5 UP

bmill3r/mac-dev-playbook

Basic web and app developer Mac setup in Ansible playbooks.

bmill3r/pyranges

(beta) Performant Pythonic GenomicRanges

bmill3r/veloviz

RNA-velocity informed embeddings for visualizing cellular trajectories

bmill3r/website_old

bmill3r/XPRESSpipe

An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data

bmill3r/ZNF154_Manuscript

Code to reproduce manuscript figures