bob-carpenter
I work in computational and applied statistics, largely on the Stan probabilistic programming language, autodiff library, and Bayesian inference algorithms.
Flatiron InstituteNew York
Pinned Repositories
ad-handbook
Automatic Differentiation Handbook
adaptive-hmc
Self-tuning HMC algorithms and evaluations
anno
Models, scripts, and data sets for data annotation (aka coding, aka rating)
BayesExpress
Bayesian models for gene expression
case-studies
Case studies in applied and computational statistics.
comp-inference-reading
Home for the computational inference reading group.
diagnostic-testing
statistical models to analyze diagnostic tests
java-arithcode
A Java implementation of arithmetic coding and PPM compression.
prob-stats
Probability and Statistics: a simulation-based introduction. An open-access book.
stan-getting-started
A quarto notebook introducing Stan in Python (and maybe R).
bob-carpenter's Repositories
bob-carpenter/prob-stats
Probability and Statistics: a simulation-based introduction. An open-access book.
bob-carpenter/ad-handbook
Automatic Differentiation Handbook
bob-carpenter/case-studies
Case studies in applied and computational statistics.
bob-carpenter/adaptive-hmc
Self-tuning HMC algorithms and evaluations
bob-carpenter/comp-inference-reading
Home for the computational inference reading group.
bob-carpenter/diagnostic-testing
statistical models to analyze diagnostic tests
bob-carpenter/stan-getting-started
A quarto notebook introducing Stan in Python (and maybe R).
bob-carpenter/java-arithcode
A Java implementation of arithmetic coding and PPM compression.
bob-carpenter/BayesExpress
Bayesian models for gene expression
bob-carpenter/java-sudoku
A simple Java depth-first solver for Sudoku puzzles, with algorithm explanation and examples.
bob-carpenter/kmers
k-mer based genomics
bob-carpenter/stan-model-server
lightweight server interface to Stan model methods
bob-carpenter/CDI
Models for coherent diffraction imaging (CDI)
bob-carpenter/talks
bob-carpenter/bob-carpenter.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
bob-carpenter/bob-carpenter.github.io.old
Bob's Web Pages
bob-carpenter/finufft
Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3
bob-carpenter/transforms
Transform geometry experiments
bob-carpenter/blades-in-the-dark-srd-content
SRD for the Blades in the Dark RPG
bob-carpenter/carol-carpenter-poetry
A book of Carol Carpenter's poetry
bob-carpenter/cc-licenses
Creative Commons Licenses for Github
bob-carpenter/cryoBIFE
Repository for cryoBIFE - cryo-EM
bob-carpenter/github-pages-with-jekyll
bob-carpenter/include-code-files
bob-carpenter/pcr-sensitivity-vs-time
bob-carpenter/posteriordb
Database with posteriors of interest for Bayesian inference
bob-carpenter/rater-difficulty-paper
bob-carpenter/sciware-testing-python
bob-carpenter/test-main
test if an index with a master branch gets indexed
bob-carpenter/UNINOVE_Sao_Paulo
Covid Modeling work at UNINOVE Brazil