/db-benchmarks-2020

Database benchmarks using RESCRIPt

Primary LanguageJupyter NotebookBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

db-benchmarks-2020

Database benchmarks using RESCRIPt

Installation

Run in a QIIME 2 2020.2+ environment. See https://qiime2.org/ for installation details.

Install RESCRIPt following instructions: https://github.com/bokulich-lab/RESCRIPt/

Citation

Michael S Robeson II, Devon R O'Rourke, Benjamin D Kaehler, Michal Ziemski, Matthew R Dillon, Jeffrey T Foster, Nicholas A Bokulich. RESCRIPt: Reproducible sequence taxonomy reference database management for the masses. bioRxiv 2020.10.05.326504; doi: https://doi.org/10.1101/2020.10.05.326504