bokulich-lab/q2-types-genomics

ENH: Semantic Type for taxa specific diamond DB

Closed this issue · 0 comments

Sann5 commented

Context

  • An action to build Diamond reference databases is under development.
    • PR: bokulich-lab/q2-moshpit#TODO
    • Issue: bokulich-lab/q2-moshpit#TODO
  • This action offers the user the possibility to build diamond databases for specific taxa.
  • To do this the user must provide two additional files:
    • one containing the taxonomy data
    • and a reference fasta file.

Crux of the issue

  • There is a need to create a Semantic Type that can contain these two files, such that an artifact of this Semantic Type can be used as input to the action mentioned above (TODO: mention the action name).