Pinned Repositories
annotations
Common annotations for transcriptomics
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
backtest
bioconda-recipes
Conda recipes for the bioconda channel.
coinage
luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
r_projects
readquant
Convenience package for parsing RNA-seq quantification results
tracer
TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data
boombard's Repositories
boombard/annotations
Common annotations for transcriptomics
boombard/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
boombard/backtest
boombard/bioconda-recipes
Conda recipes for the bioconda channel.
boombard/coinage
boombard/luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
boombard/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
boombard/r_projects
boombard/flask-admin
Simple and extensible administrative interface framework for Flask
boombard/Flask-AppBuilder
Simple and rapid application development framework, built on top of Flask. includes detailed security, auto CRUD generation for your models, google charts and much more. Demo (login with guest/welcome) - http://flaskappbuilder.pythonanywhere.com/
boombard/jetbrains_settings
boombard/ngspy
boombard/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
boombard/python_utilities
boombard/readquant
Convenience package for parsing RNA-seq quantification results
boombard/scrnatb
Single Cell RNA-Seq analysis toolbox for Python
boombard/smore
An experimental collection of utilities for designing and documenting RESTful web APIs built with marshmallow
boombard/spaCy
💫 Industrial-strength Natural Language Processing (NLP) with Python and Cython
boombard/tracer
TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data
boombard/trdi_adcp_readers
Reads data from TRDI ADCP work horse data loggers
boombard/turbidity_probe
boombard/vimrc
Settings for vim as a python IDE