brechtmann

cnngeometric_pytorch

CNNGeometric PyTorch implementation

docker_gene_prio

kipoiseq

Standard set of data-loaders for training and making predictions for DNA sequence-based models.

MMSplice

Variant effect predictions on splicing

ray

A fast and simple framework for building and running distributed applications. Ray is packaged with RLlib, a scalable reinforcement learning library, and Tune, a scalable hyperparameter tuning library.

ALS-kaggle

Outlier prediction-based solution to Task1 of the End ALS Kaggle challenge

dataviz

Data Analysis and Visualization in R

gene-embedding

OUTRIDER

OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data

plotly.py

The interactive graphing library for Python :sparkles: This project now includes Plotly Express!

brechtmann/cnngeometric_pytorch

CNNGeometric PyTorch implementation

brechtmann/docker_gene_prio

brechtmann/kipoiseq

Standard set of data-loaders for training and making predictions for DNA sequence-based models.

brechtmann/MMSplice

Variant effect predictions on splicing

brechtmann/ray

A fast and simple framework for building and running distributed applications. Ray is packaged with RLlib, a scalable reinforcement learning library, and Tune, a scalable hyperparameter tuning library.