update the namespace for HGNC and Ensembl

Question

tabbassidaloii opened this issue a year ago · 4 comments

e.g. https://www.genenames.org/data/hgnc_data.php?hgnc_id= should be replaced with https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/

Answer 1 · 2023-12-07T12:34:46.000Z

Also, adding unit tests for links out maybe for all the data sources

Answer 2 · 2023-12-09T14:47:57.000Z

@tabbassidaloii, oh, that's really weird. This was fixed for HGNC almost a year ago: edad132

For Ensembl it seems to work also: https://www.ensembl.org/id/$id with the example ENSG00000139618

What software and which version are you using?

Answer 3 · 2023-12-10T08:41:09.000Z

Okay, this is weird.
I didn't use the most recent version of BridgeDb because of some other issue.
I should check. Will share the details.

Answer 4 · 2024-07-25T10:27:11.000Z

They still seem to be okay. Ping me on Slack if the problem persists, but will close this issue for now.