egonw
Open scientist teaching and doing research at Maastricht University.
@BiGCAT-UMMaastricht, The Netherlands
Pinned Repositories
BridgeDb
The BridgeDb Library source code
cdk
The Chemistry Development Kit
bacting
Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wraps common functionality, providing a toolkit independent, scriptable solution to handle data from the life sciences.
cdkbook
Groovy Cheminformatics with the Chemistry Development Kit
chembl.rdf
Scripts to create RDF for ChEMBL.
genalg
jqudt
Java library for working with the QUDT ontology and data using it.
rrdf
R package for handling RDF data.
SARS-CoV-2-Queries
Wikidata Queries around the SARS-CoV-2 virus and pandemic
rWikiPathways
R package for WikiPathways API
egonw's Repositories
egonw/cdkbook
Groovy Cheminformatics with the Chemistry Development Kit
egonw/bacting
Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wraps common functionality, providing a toolkit independent, scriptable solution to handle data from the life sciences.
egonw/wikidata-chemistry
Cache of Chemistry in Wikidata
egonw/egonw.github.com
Personal Homepage
egonw/ons-wikidata
Open Notebook for Wikidata scripts
egonw/metabolomics-practical
egonw/cdk
The Chemistry Development Kit
egonw/cdk-cxsmiles
Dagstuhl CXSMILES
egonw/scholia
Wikidata scholarly profile
egonw/biblio-fairicat
A FAIRiCat for the UGent Academic Bibliography
egonw/biohackathon-projects-2024
Project code for BioHackathon Europe 2024.
egonw/Biohackathon-SWAT4HCLS-2024
egonw/blog
Source of the chem-bla-ics blog
egonw/blog2
egonw/chempyformatics
egonw/cmlxom
A Java library for processing CML.
egonw/egonw
egonw/euclid
A Java library for 2D and 3D geometric calculations.
egonw/pathvisio-1
PathVisio - pathway editor, visualization and analysis software
egonw/pathvisio.github.io
PathVisio website and tutorials (under development)
egonw/pfocr-pmcfigurebot
Query figures indexed by PubMed Central and collect metadata
egonw/pybacting
A Python wrapper around Bacting (https://github.com/egonw/bacting)
egonw/pyBiodatafuse
Python package for biodatafuse project.
egonw/qlever-control
egonw/queryservice
Queryservice, based on the Wikidata query service, with very few modifications.
egonw/specifications-3
NanoCommons Specifications
egonw/STREAMLINEworkshop.github.io
egonw/synia4sadik
egonw/user-handbook
NanoMaterialCommons User Handbook
egonw/void-generator
Calculate statistics for use in a Service Description or Void file