broadinstitute/dig-diabetes-portal

Why is there insufficient data for 13:75900472

Closed this issue · 2 comments

http://type2diabetes-dev.elasticbeanstalk.com/variant/variantInfo/13_75900472_C_T

But, in the DB it is not monomorphic in Europeans, and IN_EXSEQ = 1

It is also show as 8:1 if you navigate to the TBC1D4 gene page, then click on exome seq/nominal significance (the 3 variants link)

Yes, this is definitely a bug. I have need to refine the logic I'm using
to flash the "insufficient data" message. Thanks for the example.

On Sun, Oct 19, 2014 at 2:59 PM, flannick notifications@github.com wrote:

http://type2diabetes-dev.elasticbeanstalk.com/variant/variantInfo/13_75900472_C_T

But, in the DB it is not monomorphic in Europeans, and IN_EXSEQ = 1

It is also show as 8:1 if you navigate to the TBC1D4 gene page, then click
on exome seq/nominal significance (the 3 variants link)


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#78.

Fixed. Individual subsections of the variant page were checking to see if all of the fields they depended on were: 1) non-null; and 2) nonzero. This approach was incorrect, since 0 is a legal value. I now reject records only if the fields I need are actually null.