Pinned Repositories
cellxgene-gateway
Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.
diffxpy
Differential expression analysis for single-cell RNA-seq data.
NSForest
NSForest_test
pubmed_search
Parallelized search for keywords in PubMed with beautifulsoup
sceasy
A package to help convert different single-cell data formats to each other
spSeudoMap
spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data
StainTools
Tools for tissue image stain normalisation and augmentation in Python 3
STopover
capturing spatial colocalization and interaction in the TME using topological analysis in spatial transcriptomics data
STquantool
ST analysis tool to visualize and quantify multiple datasets
CellDART
domain adaptation of spatial and single-cell transcriptome
bsungwoo's Repositories
bsungwoo/spSeudoMap
spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data
bsungwoo/STopover
capturing spatial colocalization and interaction in the TME using topological analysis in spatial transcriptomics data
bsungwoo/cellxgene-gateway
Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.
bsungwoo/diffxpy
Differential expression analysis for single-cell RNA-seq data.
bsungwoo/NSForest
NSForest_test
bsungwoo/pubmed_search
Parallelized search for keywords in PubMed with beautifulsoup
bsungwoo/sceasy
A package to help convert different single-cell data formats to each other
bsungwoo/StainTools
Tools for tissue image stain normalisation and augmentation in Python 3
bsungwoo/STquantool
ST analysis tool to visualize and quantify multiple datasets