https://data.broadinstitute.org/alkesgroup/LDSCORE/eur_w_ld_chr.tar.bz2 download problem?
Opened this issue · 4 comments
zara03 commented
i am trying to find this file, where to download it?
https://data.broadinstitute.org/alkesgroup/LDSCORE/eur_w_ld_chr.tar.bz2
jaamarks commented
zara03 commented
Thank you so much.
I need eur_w_ld_chr.tar.bz2<https://alkesgroup.broadinstitute.org/LDSCORE/eur_w_ld_chr.tar.bz2/> this file. I am trying to compute ldsc regression.
Is this right one:
1000G_Phase3_ldscores.tgz<https://zenodo.org/records/10515792/files/1000G_Phase3_ldscores.tgz?download=1>?
Thank you
From: Jesse Marks ***@***.***>
Date: Monday, April 22, 2024 at 2:58 PM
To: bulik/ldsc ***@***.***>
Cc: Syeda, Zehra ***@***.***>, Author ***@***.***>
Subject: Re: [bulik/ldsc] https://data.broadinstitute.org/alkesgroup/LDSCORE/eur_w_ld_chr.tar.bz2 download problem? (Issue #429)
https://zenodo.org/records/10515792
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jaamarks commented
I don't remember exactly. Just download it and extract the files from it to see. The data are also on Google Cloud at: https://console.cloud.google.com/storage/browser/broad-alkesgroup-public-requester-pays
zara03 commented
I got the files from the link.thank you so much.
I actually run LDSC regression but when i am comparing to results of a person who did same analysis with version 1 , one year back i ma having non significant p values as compared to them while rg is almost the same.
Is there any step i should do in addition to tutorial steps?
Thank you so much once again