cBioPortal/oncotree

Duplicated Oncotree Codes: IDCS FDCS MPN

sheridancbio opened this issue · 1 comments

These codes are duplicated in the new "Edited Oncotree" worksheet. IDCS is "Interdigitating Dendritic Cell Sarcoma (IDCS)" ... and on one row it has parent Dendritic Cell Sarcoma (DCS) and in another row it has parent Histiocytic and Dendritic Cell Neoplasms (HDCN)
This would no longer be a tree if a node has two separate parents.

The same situation exists for Follicular Dendritic Cell Sarcoma (FDCS)

MPS is simply duplicated on lines 785 and 789 .. or some info is missing from 789 to create another lower level node.

Resolved by removing MPS duplicate, and by setting MainType for IDCS and FDCS and removing the duplicate from the SOFT_TISSUE tree