cBioPortal/oncotree

Issues

• Mappings in mappings file vs the web service

  #268 opened 4 months ago by bgyori
  1

• API down or not operational?

  #265 opened 6 months ago by sigven
  3

• TCGA sample mapping?

  #200 opened 5 years ago by sigven
  7

• R package mskcc.oncotree

  #258 opened 3 years ago by ramiromagno
  0

• A cancer_type.txt file of all cancer types for cBioportal?

  #252 opened 3 years ago by wangshun1121
  0

• Updates to Oncotree NCI/UMLS Mappings

  #203 opened 3 years ago by n1zea144
  1

• Add a FAQ section

  #242 opened 3 years ago by zhx828
  0

• Include OncoTree paper on the website

  #237 opened 3 years ago by zhx828
  3

• user wishes to map combination of ICDO Topology and ICDO Morphology codes

  #236 opened 4 years ago by sheridancbio
  1

• non-ascii characters in ontology mapping file

  #235 opened 4 years ago by sheridancbio
  0

• oncotree_to_oncotree.py Python 3 support

  #209 opened 4 years ago by n1zea144
  1

• Allow user to download the current version of the oncotree as text file

  #201 opened 5 years ago by zhx828
  4

• Review Mapping Tool PR to support Python 3.

  #212 opened 4 years ago by n1zea144
  3

• Many to one mapping

  #234 opened 4 years ago by pagarwal14
  0

• AttributeError: module 'urllib' has no attribute 'urlopen'

  #230 opened 4 years ago by nroak
  0

• Craniopharyngioma oncotree abbreviations inconsistent

  #220 opened 4 years ago by jjgao
  0

• oncotree_candidate_release should be checked for missing NCI / UMLS links

  #80 opened 5 years ago by sheridancbio
  1

• Support AND/OR logic in the search box

  #194 opened 5 years ago by zhx828
  0

• Support the search in the URL

  #195 opened 5 years ago by zhx828
  0

• oncotree updates

  #193 opened 5 years ago by jharenza
  0

• Tooltip missing parenthesized portion of detailed cancer type

  #154 opened 6 years ago by sheridancbio
  2

• Tumor Types API not supporting forward slash in query

  #134 opened 6 years ago by gearve14
  3

• Website rendering : portions of the tree may not be visible

  #148 opened 6 years ago by sheridancbio
  0

• Add warning to main webpage when viewing oncotree_development version

  #72 opened 6 years ago by sheridancbio
  1

• favicon not displayed

  #71 opened 6 years ago by sheridancbio
  1

• API search endpoint has bad default argument for levels on swagger page

  #145 opened 6 years ago by caaespin
  3

• API ignores "levels" parameter

  #77 opened 6 years ago by sheridancbio
  1

• Make more resilient : the caching of UMLS / NCI codes

  #81 opened 7 years ago by sheridancbio
  0

• oncotree node "TISSUE" is showing NCI/UMLS codes in tumorTypes API

  #76 opened 7 years ago by sheridancbio
  0

• Re-architect maven module structure

  #70 opened 7 years ago by sheridancbio
  0

• Reduce API return type

  #69 opened 7 years ago by sheridancbio
  0

• Support MainTypes abstraction?

  #68 opened 7 years ago by sheridancbio
  0

• Deprecated property?

  #67 opened 7 years ago by sheridancbio
  0

• Swagger spec needs revision

  #66 opened 7 years ago by sheridancbio
  0

• Webpage rendering issues : label positions inconsistent

  #65 opened 7 years ago by sheridancbio
  0

• clean up version branches

  #63 opened 7 years ago by sheridancbio
  0

• Oncotree Node present in TopBraid missing from tumorTypes API output

  #50 opened 7 years ago by sheridancbio
  1

• Oncotree node "TISSUE" .. is it valid? Does it have a defined color?

  #43 opened 8 years ago by sheridancbio
  1

• Oncotree records missing appropriate properties

  #42 opened 8 years ago by sheridancbio
  0

• Additional meta info for Version

  #45 opened 8 years ago by sheridancbio
  0

• Duplicated Oncotree Codes: IDCS FDCS MPN

  #40 opened 8 years ago by sheridancbio
  1

• add support for the version to the URL that shows the Oncotree GUI?

  #23 opened 8 years ago by zhx828
  1

• Endometrioid Carcinoma (CEEN) should be renamed

  #21 opened 8 years ago by j-hudecek
  2

• OncoTree is not working in IE11

  #19 opened 9 years ago by zhx828
  0

• WebAPI Design

  #3 opened 9 years ago by aijazs
  3

• Add oncotree data to this repo

  #2 opened 9 years ago by jjgao
  0