Pinned Repositories
cbioportal
cBioPortal for Cancer Genomics
datahub
A centralized location for storing curated data from cBioPortal
genome-nexus
Backend server for Genome Nexus
CyThesaurus
CyThesaurus (ID Mapping) Plugin for Cytoscape
mutantpdb
obo-parser
OBO Parser
mutationhotspots
Algorithms to detect mutational hotspots
oncokb
oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
jjgao's Repositories
jjgao/mutantpdb
jjgao/CyThesaurus
CyThesaurus (ID Mapping) Plugin for Cytoscape
jjgao/obo-parser
OBO Parser
jjgao/biojava
BioJava is an open-source project dedicated to providing a Java framework for processing biological data.
jjgao/biojava-tutorial
A tutorial for BioJava
jjgao/bridgedb-app
BridgeDb App for Cytoscape 3
jjgao/cbioportal
jjgao/cbioportal-frontend
React Frontend of cBioPortal :tada:
jjgao/cbioportal_search
cBioPortal Search Prototype
jjgao/chart-doctor
Sample files to accompany the FT's Chart Doctor column
jjgao/coda
jjgao/genome-nexus
Interpreting cancer genomics data
jjgao/genome-nexus-annotation-pipeline
jjgao/hotspots
Identifying recurrent mutations in cancer
jjgao/markdown-toc
MarkdownTOC(Table Of Contents) Plugin for Visual Studio Code.
jjgao/mmtf-spark
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
jjgao/mmtf-workshop-2017
Structural Bioinformatics Training Workshop & Hackathon 2017
jjgao/mutationhotspots
Algorithms to detect mutational hotspots
jjgao/oncokb
jjgao/oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
jjgao/pcviz
Pathway Commons Bio Network Visualizer
jjgao/plotly.js
The open source javascript graphing library that powers plotly
jjgao/spectacle
Spectacle allows you to organize your windows without using a mouse.
jjgao/ThreeColumnsToMatrix
Converting three column data to a matrix
jjgao/UniProtPyUtils
jjgao/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
jjgao/workbench
A community shared resource of Python and R Notebooks that utilize the cBioPortal API for various analysis recipes
jjgao/You-Dont-Know-JS
A book series on JavaScript. @YDKJS on twitter.