Oncotree Node present in TopBraid missing from tumorTypes API output
sheridancbio opened this issue · 1 comments
sheridancbio commented
TopBraid repo contains concept: http://data.mskcc.org/ontologies/oncotree/ONC000604
preferred label: Uterine Undifferentiated Carcinoma
notation: UUC
The output from:
http://pipelines.cbioportal.mskcc.org:38080/oncotree/api/tumorTypes?flat=true&deprecated=false
contains every other node except for this one.
Using flat=false or using deprecated=true does not produce the missing node either.
sheridancbio commented
This has been corrected. This was mistakenly reported as UUC, but the code which was missing was UUS (Undifferentiated Uterine Sarcoma). The code was not present in TopBriad, and it has now been added in the version oncotree_2017_06_21