cabeen

Machine Learning | Software Engineering | Computational Imaging | Neuroinformatics | Digital Pathology

PathAILos Angeles, California USA

Pinned Repositories

auditory-pathway
A repository of tools for mapping the auditory pathway with diffusion MRI
Language:Makefile1 1 00
bibfmt
A tool for formatting identifiers in bibtex databases
Language:TeX10
brainvis-d3
Software for interactive web-based visualization of brain connectivity/matrix data using D3.js
Language:JavaScript2 1 00
hyperspectral-sections
A visualization tool for exploring hyperspectral images
Language:C++2 2 03
neu-net
A flexible and practical software package for applying U-net models to biomedical 3D image segmentation tasks.
Language:Python2 1 00
niftijio
A Java library for reading and writing NIfTI volumes
Language:Java13 4 512
parsebruker
A tool for converting Bruker method files into JSON
Language:Python2 1 00
qit
A repository for the Quantitative Imaging Toolkit (QIT)
Language:Java20 2 12
span-mri
Rodent MRI Analysis Tools for the Stroke Preclinical Assessment Network
Language:Shell2 2 00
video-textures-opencv
An OpenCV implementation of Video Textures.
Language:C++3 1 00

cabeen/qit
A repository for the Quantitative Imaging Toolkit (QIT)
Language:Java20 2 12
cabeen/niftijio
A Java library for reading and writing NIfTI volumes
Language:Java13 4 512
cabeen/video-textures-opencv
An OpenCV implementation of Video Textures.
Language:C++3 1 00
cabeen/brainvis-d3
Software for interactive web-based visualization of brain connectivity/matrix data using D3.js
Language:JavaScript2 1 00
cabeen/hyperspectral-sections
A visualization tool for exploring hyperspectral images
Language:C++2 2 03
cabeen/neu-net
A flexible and practical software package for applying U-net models to biomedical 3D image segmentation tasks.
Language:Python2 1 00
cabeen/parsebruker
A tool for converting Bruker method files into JSON
Language:Python2 1 00
cabeen/span-mri
Rodent MRI Analysis Tools for the Stroke Preclinical Assessment Network
Language:Shell2 2 00
cabeen/auditory-pathway
A repository of tools for mapping the auditory pathway with diffusion MRI
Language:Makefile1 1 00
cabeen/bibfmt
A tool for formatting identifiers in bibtex databases
Language:TeX10
cabeen/epibios-mri-rat
A repo for EpiBioS4Rx rodent MRI
Language:Makefile1 2 00
cabeen/mat-qt
A Quicktime based video reader for Matlab
Language:C1 1 0
cabeen/neutube
Language:C++1 1 0
cabeen/qit-bundle
A tool for creating bundle definitions for the QIT diffusion MRI pipeline
Language:Shell1 2 0
cabeen/snakes-on-a-sphere
A 3D version of snake
Language:C++1 1 0