callahantiff/PheKnowLator
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
PythonApache-2.0
Issues
- 6
Disappearing edges when creating KG
#140 opened by GuarinoValentina - 0
- 3
GitHub Actions -- Docker build-push-action failing
#137 opened by callahantiff - 1
- 5
Simplify input files -- input yaml
#127 opened by callahantiff - 2
- 8
Set-up SPARQL Endpoint
#69 opened by callahantiff - 5
Create Docker Container for Neo4J instance
#47 opened by callahantiff - 15
Create Edge-Type Attribute File
#99 opened by callahantiff - 18
Foreign characters in node labels
#118 opened by sanyabt - 5
Newline char in node description/definition causes dirty lines in node metadata files
#116 opened by nomisto - 3
Adding Edge Pattern and Relation Types
#114 opened by callahantiff - 7
requirements.txt
#115 opened by Bancherd-DeLong - 0
New Resource Request: LINCS
#113 opened by callahantiff - 0
Incorporating Ensmallen -- 🔮 Magic ✨ 🎩
#107 opened by callahantiff - 6
Enabling Google GCS Directory Listing
#91 opened by callahantiff - 0
July 2021 Build -- Delay
#102 opened by callahantiff - 21
✅ - Need pkt Build Framework Overview Figure
#79 opened by callahantiff - 4
Pheknowlator knowledge graph in OBO format
#92 opened by ablack3 - 1
- 3
- 1
- 0
Wiki: Create Endpoint Page
#88 opened by callahantiff - 2
Setting Up and End-to-End CI/CD Framework
#68 opened by callahantiff - 1
Publish code to PyPI
#45 opened by callahantiff - 1
TODO: Move print statements to logging
#53 opened by callahantiff - 0
Create Build Dashboard
#86 opened by callahantiff - 6
Add integer and identifiers to node metadata
#58 opened by callahantiff - 1
Determine KG Baseline Format
#74 opened by callahantiff - 5
- 1
Verify KG Output File Types
#55 opened by callahantiff - 4
- 1
Other: Add sparse KG representation output
#60 opened by callahantiff - 0
- 2
Handling MESH-CHEBI Mappings
#77 opened by callahantiff - 3
Configure Google Cloud Storage
#70 opened by callahantiff - 0
- 1
Add Baseline KG Embeddings To CI/CD
#71 opened by callahantiff - 6
Wiki: Update v2.0.0 data source hyperlinks
#52 opened by callahantiff - 2
- 0
- 0
Migrate from Travis CI to GitHub Actions
#66 opened by callahantiff - 2
Coding: Add Jupyter Notebook to Dockerfile
#65 opened by LeRicNet - 2
Preparing for ISMB Bio-Ontologies Task
#67 opened by callahantiff - 4
- 1
- 1
- 11
TODO: Finalize KG Construction Survey
#54 opened by callahantiff - 3
- 1
Update Dockerfile
#46 opened by callahantiff