Pinned Repositories
caMicroscope
Digital pathology image viewer with support for human/machine generated annotations and markups.
camicroscope.github.io
caMicroscope organization page
Caracal
Conslidated Backend, Auth, and Security Services for caMicroscope
Distro
Docker distribution of camicroscope and all its components
GSOC
Self-Contained Project Ideas from caMicroscope (Ideal for GSoC or small grants)
iipImage
Containerized IIP
ImageLoader.py
Python utility that also does image loading. Used for large scale image loading where images are already available and all that is needed is to extract and store the metadata.
oss-lite
SlideLoader
Tool for loading slide metadata for caMicroscope
tfjs-models
Sample Models for use with caMicroscope
caMicroscope's Repositories
camicroscope/caMicroscope
Digital pathology image viewer with support for human/machine generated annotations and markups.
camicroscope/GSOC
Self-Contained Project Ideas from caMicroscope (Ideal for GSoC or small grants)
camicroscope/Distro
Docker distribution of camicroscope and all its components
camicroscope/Caracal
Conslidated Backend, Auth, and Security Services for caMicroscope
camicroscope/tfjs-models
Sample Models for use with caMicroscope
camicroscope/camicroscope.github.io
caMicroscope organization page
camicroscope/SlideLoader
Tool for loading slide metadata for caMicroscope
camicroscope/oss-lite
camicroscope/BFBridge
Bioformats Bridge
camicroscope/docs
Documentation for caMicroscope
camicroscope/iipImage
Containerized IIP
camicroscope/ImageLoader
APIs for loading whole slide images onto caMicroscope.
camicroscope/ImageLoader.py
Python utility that also does image loading. Used for large scale image loading where images are already available and all that is needed is to extract and store the metadata.
camicroscope/rbac-admin
rbac admin portal
camicroscope/ViewerDockerContainer
Dockerfile for caMicroscope viewer. Includes Apache, PHP, IIPSrv and caMicroscope.
camicroscope/.github
Repository for Community Support Documents
camicroscope/3dPrintedMicroscope
Special code for using caMicroscope live with a 3d printed microscope
camicroscope/bindaas
Dockerfile for bindaas
camicroscope/DataDockerContainer
Dockerfile for the Data layer of caMicroscope. Installs Mongo, Bindaas and mounts appropriate directories from the file system.
camicroscope/dicomsrv
caMicroscope DICOM server (Orthanc) build scripts
camicroscope/DynamicServices
camicroscope/eaglescope
Hierarchical and Cohort Visualization
camicroscope/FlexTables
Tabular browsing of hierarchical REST APIs
camicroscope/image-decoders
camicroscope/LoaderDockerContainer
Dockerfile for loader docker container. Includes uAIMLoader and ImageLoader.
camicroscope/Nanoborb
camicroscope/OrderingService
Ordering service for camicroscope. Used by Dynamic Services etc.
camicroscope/orthanc-indexer
Orthanc indexer plugin fork with caMicroscope patches
camicroscope/security-router-v2
Security, user authentication and landing page for caMicroscope
camicroscope/uAIMDataLoader
API for loading Markups for caMicroscope.