Pinned Repositories
ADMIXTURE-stats
CorrSieve helper scripts for ADMIXTURE data
amakihi_GO
Script to perform GO enrichment tests for avian malaria challenge experiments in 'amakihi
Avipoxvirus
Pipeline to identify avipoxivirus sequences
BaitsTools
Software for hybridization capture bait design
Elephants
Pipeline for Elephant Genotyping
kinshipUtils
Kinship bootstrapping and triangular matrices
RatesTools
Pipeline to calculate de novo mutation rates from parent-offspring trios
rCorrSieve
R implementation of CorrSieve
rubyCorrSieve
Ruby implementation of CorrSieve
vcf2aln
Script to convert multi-sample VCFs to FASTA alignments
campanam's Repositories
campanam/BaitsTools
Software for hybridization capture bait design
campanam/vcf2aln
Script to convert multi-sample VCFs to FASTA alignments
campanam/RatesTools
Pipeline to calculate de novo mutation rates from parent-offspring trios
campanam/Elephants
Pipeline for Elephant Genotyping
campanam/ADMIXTURE-stats
CorrSieve helper scripts for ADMIXTURE data
campanam/amakihi_GO
Script to perform GO enrichment tests for avian malaria challenge experiments in 'amakihi
campanam/Avipoxvirus
Pipeline to identify avipoxivirus sequences
campanam/bait-development
Scripts and tools for bait set development
campanam/congenlib
Ruby library for conservation genomics
campanam/kinshipUtils
Kinship bootstrapping and triangular matrices
campanam/rCorrSieve
R implementation of CorrSieve
campanam/rubyCorrSieve
Ruby implementation of CorrSieve
campanam/FAECES
Scripts to analyze noninvasive DNA from Mojave canid scats
campanam/genome_coverage
Script to calculate genome coverage from a BEDGRAPH (bga)
campanam/genome_decontaminate
Script to remove NCBI-identified contaminant sequences from a genome
campanam/uce2speciestree
Pipeline script to generate input files for ASTRAL and SVDquartets from phyluce nexus alignments
campanam/ucealnstats
Calculate taxon-specific alignment statistics from a collection of UCE alignments