campanam/BaitsTools

Issues

• Installing Error

  #45 opened 9 months ago
  1

• [BUG] aln2baits does not permute correctly

  #43 opened a year ago
  1

• [BUG] Possible infinite loop in aln2baits variant option

  #42 opened a year ago
  1

• [BUG] --shuffle option infinite loop

  #41 opened a year ago
  1

• Parameters File Error

  #40 opened a year ago
  3

• [BUG] baitstoolsgui calls baitstools.rb

  #39 opened 2 years ago
  1

• [FEATURE REQUEST] Effective bait depth

  #38 opened 3 years ago
  0

• [FEATURE REQUEST] BaitsTools version in Log

  #36 opened 3 years ago
  1

• [BUG] Annotations without matching reference sequence

  #35 opened 3 years ago
  1

• [FEATURE REQUEST] Taxa Missing Data for VCF Filtering

  #34 opened 3 years ago
  0

• [FEATURE REQUEST] Multi-length bait output

  #32 opened 3 years ago
  1

• [FEATURE REQUEST] Log Improvements

  #29 opened 5 years ago
  1

• macOS Mojave & GUI [BUG]

  #26 opened 5 years ago
  1

• vcf header white line [BUG]

  #25 opened 5 years ago
  1

• Path Expansion with Escape Characters [BUG]

  #24 opened 5 years ago
  1

• blast2baits unfound sequence [BUG]

  #23 opened 5 years ago
  1

• Time needed for bait generation

  #19 opened 5 years ago
  2

• GATK intervals

  #18 opened 5 years ago
  1

• RNG Seed Option

  #17 opened 5 years ago
  1

• checkbaits bed filtering

  #15 opened 3 years ago
  1

• annot2baits crashes when no matching annotation extracted

  #14 opened 6 years ago
  0

• Line 558 in baitstools.rb

  #13 opened 6 years ago
  0

• BUG: aln2baits EXTEND option

  #11 opened 6 years ago
  0

• FEATURE REQUEST: Bait spacing complementation

  #6 opened 3 years ago
  1

• Circular sequences can only go around once in each direction

  #5 opened 5 years ago
  1

• FEATURE REQUEST: Uncollapsed PyRAD refseq

  #4 opened 6 years ago
  1

• FEATURE REQUEST: Bait shuffling for contig ends

  #3 opened 6 years ago
  1

• FEATURE REQUEST: aln2baits/annot2baits circular sequences

  #2 opened 5 years ago
  1