Pinned Repositories
OpenPBTA-analysis
The analysis repository for the Open Pediatric Brain Tumor Atlas Project
refinebio-examples
Example workflows for refine.bio data
alevinQC
Create QC and summary reports for Alevin output
baselineWavelet
Intelligent background-correction algorithm for highly fluorescent sample in Raman spectroscopy
cansavvy.github.io
Example website for DataTrail
cansavvy_blog
Candy Bytes
Choosing_Genomics_Tools
A course to help learners find resources and tools to help them process and interpret their genomic data
Adv_Reproducibility_in_Cancer_Informatics
This course the second course in a two part series that discusses reproducibility in the context of cancer informatics.
Documentation_and_Usability
A course to cover the basics of creating documentation and tutorials to maximize the usability of informatics tools
Reproducibility_in_Cancer_Informatics
This course discusses reproducibility and replicability in the context of cancer informatics.
cansavvy's Repositories
cansavvy/alevinQC
Create QC and summary reports for Alevin output
cansavvy/baselineWavelet
Intelligent background-correction algorithm for highly fluorescent sample in Raman spectroscopy
cansavvy/datascience_for_biologists
Course materials for Rowan University Course "Data Science for Biologists"
cansavvy/GenomicDataMiningProcessing
Code for data I've found and might want to use
cansavvy/mi_quiz_grader
Grades the Ultimate Michigan Trivia Quiz
cansavvy/ReimersLab
Code I'vs made for Reimers Lab projects
cansavvy/savonen_cv
The curriculum vitae of Candace Lee Savonen.
cansavvy/single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
cansavvy/svcnvplus
R package for handling SV and CNV datasets
cansavvy/WesternBlotQuantifications
Creating an automated western blot quantification code. No drawing squares needed.
cansavvy/WetLabThings
Code that automates different calculations for wet lab work.