Pinned Repositories
autism-fmt1
cookiecutter-qiime2-plugin
Template to help you create your new QIIME 2 plugin. 🚀
developing-with-qiime2
Your guide for writing, testing, and distributing QIIME 2 plugins, interfaces, and documentation.
genome-sampler
longitudinal-notebooks
mockrobiota
A public resource for microbiome bioinformatics benchmarking using artificially constructed (i.e., mock) communities.
sourcetracker2
SourceTracker2
student-microbiome-project
Central repository for data and analysis tools for the StudentMicrobiomeProject.
tax-credit
A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools
tax-credit-data
raw data from tax-credit project
caporaso-lab's Repositories
caporaso-lab/tax-credit
A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools
caporaso-lab/student-microbiome-project
Central repository for data and analysis tools for the StudentMicrobiomeProject.
caporaso-lab/autism-fmt1
caporaso-lab/cloaked-octo-ninja
Comparative analysis of high-level OTU picking protocols
caporaso-lab/tax-credit-code
Microbiome benchmarking code and jupyter notebooks from the tax-credit project
caporaso-lab/office-microbes
Notebooks and code for our Sloan office microbiome project.
caporaso-lab/SurveySync
Google Sheets Add-On to facilitate sync and validation of 3rd-party survey data
caporaso-lab/q2devtools
caporaso-lab/sample-classifier-ms
Manuscript describing q2-sample-classifier
caporaso-lab/scikit-bio-presentations
Repository of presentations about scikit-bio.