Pinned Repositories
alpine-miniconda-singularity
Singularity container with Alpine OS, and miniconda3 installed in /opt/miniconda.
carissableker
github profiles
dynGENIE3
Semi-parametric approach for the inference of gene regulatory networks from time series of expression data
ecocyc-notebook
A neo4j server and a jupyter-notebook interface to EcoCyc 21.5
jupyter-graph-notebook
Docker container built on jupyter/scipy-notebook with network visualization packages.
monotone_spline
mpi4pydistributor
Simple task distributor using mpi4py.
neo4j-KEGG
KEGG in neo4j database.
Reddit_Analysis
thresholding
Repository for thresholding code.
carissableker's Repositories
carissableker/thresholding
Repository for thresholding code.
carissableker/jupyter-graph-notebook
Docker container built on jupyter/scipy-notebook with network visualization packages.
carissableker/monotone_spline
carissableker/neo4j-KEGG
KEGG in neo4j database.
carissableker/Reddit_Analysis
carissableker/alpine-miniconda-singularity
Singularity container with Alpine OS, and miniconda3 installed in /opt/miniconda.
carissableker/carissableker
github profiles
carissableker/dynGENIE3
Semi-parametric approach for the inference of gene regulatory networks from time series of expression data
carissableker/ecocyc-notebook
A neo4j server and a jupyter-notebook interface to EcoCyc 21.5
carissableker/mpi4pydistributor
Simple task distributor using mpi4py.
carissableker/my-cpp-project-template
Basic template to start off C++ projects, with Makefile, src and include folders.
carissableker/neo4j-biocyc-ecoli
Docker container built on neo4j containing the graph of Escherichia coli.
carissableker/PyBoolNet
PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.
carissableker/python-panther
Python interface to the http://www.pantherdb.org/ API
carissableker/RMTGeneNet
Construction of gene co-expression networks with Random Matrix Theory (RMT) thresholding.
carissableker/slack-to-slack
Slack Developer Kit for Python