/linescan_tool

A tool that creates a line scan and performs peak detection and alignment based on FIJI ROIs.

Primary LanguageJupyter NotebookMIT LicenseMIT

linescan_tool

A tool that creates a line scan and performs peak detection and alignment based on FIJI ROIs.

Installation

linescan_tool can be installed using pip from this repository as follows:

pip install git+git://github.com/gerlichlab/linescan_tool

linescan_tool has a number of requirements that will be installed by pip if you do not already have them.

Usage