Pinned Repositories
analyze_clusters
Camilli Laboratory's Genome-Wide Detection of Conservative Site-Specific Recombination in Bacteria
Awesome-Linux-Software
A list of awesome applications, software, tools and other materials for Linux distros.
biotools
A library of tools to make working with Biological file formats easier
CooperLabWebsite.github.io
Lab Website
gists
growthcurves
isolate_parsers
LabScripts
Lolipop
Muller diagrams excel at visualizing evolutionary dynamics of a population over time. A common use case, and the intended use case during development, describes the abundance and succession of genotypes within a population derived from sequencing data from samples at specified timepoints. This provides a useful method of quickly discerning the evolutionary relationship between genotypes seen in a population and how this changes over time.
rnaseq
A general workflow for RNAseq analysis.
cdeitrick's Repositories
cdeitrick/Lolipop
Muller diagrams excel at visualizing evolutionary dynamics of a population over time. A common use case, and the intended use case during development, describes the abundance and succession of genotypes within a population derived from sequencing data from samples at specified timepoints. This provides a useful method of quickly discerning the evolutionary relationship between genotypes seen in a population and how this changes over time.
cdeitrick/growthcurves
cdeitrick/LabScripts
cdeitrick/rnaseq
A general workflow for RNAseq analysis.
cdeitrick/analyze_clusters
Camilli Laboratory's Genome-Wide Detection of Conservative Site-Specific Recombination in Bacteria
cdeitrick/Awesome-Linux-Software
A list of awesome applications, software, tools and other materials for Linux distros.
cdeitrick/biotools
A library of tools to make working with Biological file formats easier
cdeitrick/CooperLabWebsite.github.io
Lab Website
cdeitrick/gists
cdeitrick/isolate_parsers
cdeitrick/Juxtaposer
Juxtaposer is software used to identify actively mobile genomic elements using Hight Throughput Sequencing data.
cdeitrick/PyVCF
A Variant Call Format reader for Python.
cdeitrick/sequence_delivery_workflow
cdeitrick/sequencing_scraper
cdeitrick/tifffile
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
cdeitrick/vscooper.github.io
CooperLab webpage
cdeitrick/workflows