Pinned Repositories
Autopick-Monitor
Monitors the progress of autopicking
AutoSparc
BatchMover
Command line tool to move big EM data sets from A to B with creation of data subsets in B.
Bird-Field-Recording
Collection of tools to handle and analyze bird field recordings
Frame-Stacker
Frame-Stacker for .mrc-Frames derived from GatanK2 camera. Requires Relion to be installed.
gentleCleaner
A Python implementation of Relions gentle clean method
Mover
Moves MRC/TIF stacks from one to another place. Uses a separate job for each stack for speed up.
pyCinderella
Python wrapper to conveniently use Cinderella
SparcConnect
Libary of functions to connect to cryoSPARC2
StarTool
The Swiss Army Knife for Editing Relion .STAR Files
cdienem's Repositories
cdienem/StarTool
The Swiss Army Knife for Editing Relion .STAR Files
cdienem/AutoSparc
cdienem/pyCinderella
Python wrapper to conveniently use Cinderella
cdienem/SparcConnect
Libary of functions to connect to cryoSPARC2
cdienem/gentleCleaner
A Python implementation of Relions gentle clean method
cdienem/Autopick-Monitor
Monitors the progress of autopicking
cdienem/BatchMover
Command line tool to move big EM data sets from A to B with creation of data subsets in B.
cdienem/Bird-Field-Recording
Collection of tools to handle and analyze bird field recordings
cdienem/Frame-Stacker
Frame-Stacker for .mrc-Frames derived from GatanK2 camera. Requires Relion to be installed.
cdienem/Mover
Moves MRC/TIF stacks from one to another place. Uses a separate job for each stack for speed up.
cdienem/OutputMailer
Emailing output from jobs running on GWDG cluster
cdienem/Solitaire
cdienem/TheQube
This is a just for fun project to solve a puzzle cube computationally
cdienem/Tools
Collection of scripts and snippets