Pinned Repositories
CIPR-Package
Cluster Identity Predictor (R package implementation)
ImpulseDE
ImpulseDE
Nguyen_Pervolarakis_Nat_Comm_2018
Supplementary software for "Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity"
omicsplayground
Visual self-service analytics platform for big omics data.
scrublet
Detect doublets in single-cell RNA-seq data
stages-mirror
SCPA
R package for pathway analysis in scRNA-seq data
OmicSelector
OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.
Connectome
ReactomeGSA
R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis
cdkodira's Repositories
cdkodira/CIPR-Package
Cluster Identity Predictor (R package implementation)
cdkodira/ImpulseDE
ImpulseDE
cdkodira/Nguyen_Pervolarakis_Nat_Comm_2018
Supplementary software for "Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity"
cdkodira/omicsplayground
Visual self-service analytics platform for big omics data.
cdkodira/scrublet
Detect doublets in single-cell RNA-seq data
cdkodira/stages-mirror