changchuanjun
Horticultural Plant(Apple🍎) DNA methylation、RNAseq、Genomics......
Northwest A&F UniversityYangling，Shaanxi province，China
Pinned Repositories
A_reminder_in_GDR
A reminder: a Peach genome annotation file(Prunus persica Genome v2.0.a1) has been updated.
bulk-RNAseq-script
bulk RNAseq pipeline
Gene-structure-annotation
Protein-coding genes prediction using BRAKER3 pipeline
Genome-repeat-annotation
Genome repeat annotation using RepeatModeler and RepeatMasker
python-script
python script facilitates work
Same-genus-all-plants-whole-genome-transcription-factors-identification
Same genus plant whole genome transcription factors identify
Species-tree-using-Single_Copy_Orthologue_Sequences
Species tree using Single_Copy_Orthologue_Sequences
Bismark
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
jcvi
Python library to facilitate genome assembly, annotation, and comparative genomics
changchuanjun's Repositories
changchuanjun/Gene-structure-annotation
Protein-coding genes prediction using BRAKER3 pipeline
changchuanjun/Genome-repeat-annotation
Genome repeat annotation using RepeatModeler and RepeatMasker
changchuanjun/Same-genus-all-plants-whole-genome-transcription-factors-identification
Same genus plant whole genome transcription factors identify
changchuanjun/Species-tree-using-Single_Copy_Orthologue_Sequences
Species tree using Single_Copy_Orthologue_Sequences
changchuanjun/A_reminder_in_GDR
A reminder: a Peach genome annotation file(Prunus persica Genome v2.0.a1) has been updated.
changchuanjun/bulk-RNAseq-script
bulk RNAseq pipeline
changchuanjun/python-script
python script facilitates work