changrong1023's Stars
meyresearch/DL_protein_ligand_affinity
From Proteins to Ligands: Decoding Deep Learning Methods for Binding Affinity Prediction
wolberlab/OpenMMDL
Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes
igvteam/igv-reports
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
mourisl/centrifuger
Classifier for metagenomic sequences using FM-index with run-block compressed BWT.
Pakillo/LM-GLM-GLMM-intro
A unified framework for data analysis with GLM/GLMM in R
zylon-ai/private-gpt
Interact with your documents using the power of GPT, 100% privately, no data leaks
BrooksResearchGroup-UM/FASTDock
FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook
computational-metabolomics/structToolbox
R/Bioconductor package - STRUCT (STatistics in R Using Class Templates) Toolbox
patrickbryant1/Umol
Protein-ligand structure prediction
pablo-arantes/pdb2png
Create a PNG from a PDB file
pablo-arantes/simple-simulate-complex
Simple protein-ligand complex simulation with OpenMM
hgbrian/pdb2png
Create a PNG from a PDB file
tdudgeon/simple-simulate-complex
Simple protein-ligand complex simulation with OpenMM
ncborcherding/scRepertoire
A toolkit for single-cell immune profiling
shankarpandala/lazypredict
Lazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning
BenBeresfordJones/MGBC
The Mouse Gastrointestinal Bacteria Catalogue
lh3/seqtk
Toolkit for processing sequences in FASTA/Q formats
MDAnalysis/MDAnalysisWorkshop-Intro0.5Day
Materials for 0.5-day MDAnalysis workshops
soedinglab/metaeuk
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
julianeweller/mg2sc
Analyzing metagenomics of single cell RNA-seq
NBISweden/AGAT
Another Gtf/Gff Analysis Toolkit
seandavi/MicroBioMap
kblin/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
adamewing/methylartist
Tools for plotting methylation data in various ways
EBI-Metagenomics/genomes-catalogue-pipeline
MGnify genome analysis pipeline
pachterlab/BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
saezlab/flop
FunctionaL Omics Processing platform
gkonstantinoudis/isee_nimble_environment
lmdu/dockey
an integrated tool for molecular docking and virtual screening
pditommaso/awesome-pipeline
A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin