changrong1023

changrong1023's Stars

• Significant-Gravitas/Auto-GPT

  An experimental open-source attempt to make GPT-4 fully autonomous.

  Language:Python148k1.6k1.9k32k

• f/awesome-chatgpt-prompts

  This repo includes ChatGPT prompt curation to use ChatGPT better.

  Language:HTML107k1.4k014.6k

• AntonOsika/gpt-engineer

  Specify what you want it to build, the AI asks for clarification, and then builds it.

  Language:Python46.8k4853777.6k

• dair-ai/Prompt-Engineering-Guide

  🐙 Guides, papers, lecture, notebooks and resources for prompt engineering

  Language:MDX45.9k5121494.4k

• microsoft/TaskMatrix

  Language:Python34.3k3163393.4k

• jbhuang0604/awesome-tips

  3.3k984184

• facebookresearch/esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Python3k64315585

• aqlaboratory/openfold

  Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

  Language:Python2.6k46326476

• travistangvh/ChatGPT-Data-Science-Prompts

  A repository of 60 useful data science prompts for ChatGPT

  1.4k340245

• duerrsimon/bioicons

  A library of free open source icons for science illustrations in biology and chemistry

  Language:Vue1.2k174368

• WrightonLabCSU/DRAM

  Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

  Language:Python239630650

• YongxinLiu/EasyAmplicon

  Easy Amplicon data analysis pipeline

  Language:HTML22341595

• bluenote-1577/skani

  Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.

  Language:Rust1505248

• pachterlab/kb_python

  A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing

  Language:Python1411218023

• pha4ge/hAMRonization

  Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

  Language:Python132185325

• ModelOriented/forester

  Trees are all you need

  Language:HTML108118914

• pinin4fjords/shinyngs

  Shiny apps for NGS etc based on reusable components created using Shiny modules

  Language:HTML6861317

• leylabmpi/Struo2

  Scalable creating/updating of metagenome profiling databases

  Language:Jupyter Notebook555468

• saezlab/cosmosR

  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data sets.

  Language:R54111815

• nf-core/differentialabundance

  Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

  Language:Nextflow4614611129

• nf-core/proteinfold

  Protein 3D structure prediction pipeline

  Language:Nextflow411585429

• ikmb/MAGScoT

  MAGScoT - a MAG scoring and refinement tool

  Language:R25361

• JBEI/foldy

  Foldy: a web-based platform for interactive protein structure analysis

  Language:TypeScript213252

• r-causal/propensity

  A Toolkit for Calculating and Working with Propensity Scores

  Language:R16344

• r-causal/halfmoon

  Techniques to Build Better Balance in Propensity Score Models

  Language:R14251

• ignasrum/hocort

  HoCoRT - Remove specific organisms from sequencing reads

  Language:Python123

• Vitek-Lab/MSstatsShiny

  R-Shiny GUI integrated with the MSstats package family

  Language:R11797

• ikmb/TOFU-MAaPO

  Nextflow pipeline for the analysis of metagenomic short reads.

  Language:Nextflow7222

• nf-core/metapep

  From metagenomes to epitopes and beyond

  Language:Python656265

• smdabdoub/awesome-rm-omics

  List of software packages for repeated measures analysis in -omics data

  1200