changwn
Ph.D. working on computation biology and mathmatical modeling for biomedical data analysis.
Purdue University. ECE PhD
Pinned Repositories
ATAC_integrity
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Deconvolution_paper
reorganize paper of deconvolution method
ICPS
Accurate identification of cell type and phenotypic marker genes in single cell transcriptomic data via a data augmentation approach
ICTD
A semi-supervised cell type identification and deonvolution method for multi-omics data
MEBF
RobMixReg
Robust Mixture Regression https://cran.r-project.org/web/packages/RobMixReg/index.html
scFEA
single cell Flux Estimation Analysis (scFEA) Try the below web server!
SRMR
Spatially and Robustly Hybrid Mixture Regression Model for Interence of Spatial Dependence
CSMR
Component Sparse Mixture Regression
changwn's Repositories
changwn/scFEA
single cell Flux Estimation Analysis (scFEA) Try the below web server!
changwn/Deconvolution_paper
reorganize paper of deconvolution method
changwn/ICTD
A semi-supervised cell type identification and deonvolution method for multi-omics data
changwn/SRMR
Spatially and Robustly Hybrid Mixture Regression Model for Interence of Spatial Dependence
changwn/RobMixReg
Robust Mixture Regression https://cran.r-project.org/web/packages/RobMixReg/index.html
changwn/BC-CRC
Bi-clustering based identification of colon cancer prognosis marker gene modules in complementary to CMS classification
changwn/car_t_stimulation
Data and code for analyzing and predicting different CAR-T cell products
changwn/CARPOOL
changwn/cellrank
Probabilistic Fate Mapping using RNA Velocity
changwn/ChIP-seq_JiZhang
changwn/combinatorial_signaling_motif_libraries
changwn/DTF-Drug-Synergy
Codes and data for DTF
changwn/ECE629
changwn/enrichR
An R interface to enrichR
changwn/Kassandra
Bostongene cell deconvolution algorithm from RNAseq
changwn/MALS
changwn/mars
Discovering novel cell types across heterogenous single-cell experiments
changwn/pathview
pathway based data integration and visualization
changwn/PCASA
PCASA is a tool for predicting the best gene combination targets of surface antigens by classification of malignant and non-malignant cells using single-cell RNA-seq data.
changwn/RCATE
changwn/RobSpatialReg
Robust Spatial Mixture Regression
changwn/S4
The code for S4 project
changwn/scatterpie
:art: scatter pie plot
changwn/SCDC
SCDC
changwn/scGNN
scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
changwn/scTenifoldKnk
R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
changwn/SnapATAC
Analysis Pipeline for Single Cell ATAC-seq
changwn/spatialcluster
spatially-constrained clustering in R
changwn/TernaryBody
changwn/topology