Comprehensive Tissue Deconvolution Method Library
library("devtools")
devtools::install_github("changwn/DeconvoLib")
library("DeconvoLib")
# coming soon
DeconvoLib:: #please type left code and press "Tab" on your keyboard, you can see the all variables/function in this R package
2015-CIBERSORT-Robust enumeration of cell subsets from tissue expression profiles https://www.nature.com/articles/nmeth.3337
2016-TIMER-Comprehensive analyses of tumor immunity: implications for cancer immunotherapy. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-1028-7
2017-EPIC-Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data. https://elifesciences.org/articles/26476
If you have any questions or problems, please feel free to open a new issue here. We will fix the new issue ASAP. You can also email the maintainers and authors below.
PhD candidate at BDR group, Indiana University School of Medicine
Assistant Professor
Department of Medical & Molecular Genetics, Indiana University School of Medicine