Pinned Repositories
busco2phylo-nf
Nextflow pipeline for turning a set of BUSCO results into a species tree
busco_painter
Shiny app for painting BUSCOs across scaffolds
buscopainter
Painting chromosomes using BUSCOs
Chromosome_evolution_Lepidoptera_MS
Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
genomics_tools
Python scripts to manipulate genomic data
gff-stats
Calculate GC4 and GC3 from a gff and a fasta. Optionally in sliding windows.
hyles_manuscript
Scripts associated with Hundsdoerfer et al, 2023
lep_busco_painter
Paint chromosomes with BUSCOs
lep_fusion_fission_finder
A tool to assign ancestral linkage units and/or identify fusion/fission events in Lepidopteran chromosomes based on a set of reference BUSCO genes as markers.
synteny_plotter
A tool to visualise synteny relationships between genomes.
charlottewright's Repositories
charlottewright/Chromosome_evolution_Lepidoptera_MS
Scripts associated with 'Chromosome Evolution in Lepidoptera' manuscript
charlottewright/lep_fusion_fission_finder
A tool to assign ancestral linkage units and/or identify fusion/fission events in Lepidopteran chromosomes based on a set of reference BUSCO genes as markers.
charlottewright/synteny_plotter
A tool to visualise synteny relationships between genomes.
charlottewright/lep_busco_painter
Paint chromosomes with BUSCOs
charlottewright/genomics_tools
Python scripts to manipulate genomic data
charlottewright/buscopainter
Painting chromosomes using BUSCOs
charlottewright/busco2phylo-nf
Nextflow pipeline for turning a set of BUSCO results into a species tree
charlottewright/busco_painter
Shiny app for painting BUSCOs across scaffolds
charlottewright/gff-stats
Calculate GC4 and GC3 from a gff and a fasta. Optionally in sliding windows.
charlottewright/hyles_manuscript
Scripts associated with Hundsdoerfer et al, 2023
charlottewright/local_R
charlottewright/microsporidia_busco_painter
Paints chromosomes of microsporidian genomes with BUSCOs.