Chiu Lab

Web Site for the Chiu Lab at University of California, San Francisco

San Francisco, CA

Pinned Repositories

metaPORE
MetaPORE – Chiu Laboratory, University of California, San Francisco
Language:Shell12 7 04
MSSPE-design
Language:Perl11 5 72
SARS-CoV-2_Northern_California_genomic_surveillance
Data used for analyses in "Genomic Surveillance Reveals Multiple Introductions of SARS-CoV-2 into Northern California" (Deng et al.) https://doi.org/10.1101/2020.03.27.20044925
0 1 00
surpi
SURPI
Language:Shell83 26 3047
SURPI-plus-dist
This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical metagenomic sequence data. Please download SURPI+ software from here.
Language:Shell40 8 021
SURPIrt-dist
Language:Perl9 5 16

chiulab/surpi
SURPI
Language:Shell83 26 3047
chiulab/SURPI-plus-dist
This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical metagenomic sequence data. Please download SURPI+ software from here.
Language:Shell40 8 021
chiulab/metaPORE
MetaPORE – Chiu Laboratory, University of California, San Francisco
Language:Shell12 7 04
chiulab/MSSPE-design
Language:Perl11 5 72
chiulab/SURPIrt-dist
Language:Perl9 5 16
chiulab/SARS-CoV-2_Northern_California_genomic_surveillance
Data used for analyses in "Genomic Surveillance Reveals Multiple Introductions of SARS-CoV-2 into Northern California" (Deng et al.) https://doi.org/10.1101/2020.03.27.20044925
0 1 00