Pinned Repositories
pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
scGPT
sceasy
A package to help convert different single-cell data formats to each other
chrarnold
Singularity_images
A collection of Singularity images
task_grn_benchmark
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
UCE
UCE is a zero-shot foundation model for single-cell gene expression data
typst
A new markup-based typesetting system that is powerful and easy to learn.
udlbook
Understanding Deep Learning - Simon J.D. Prince
chrarnold's Repositories
chrarnold/chrarnold
chrarnold/Singularity_images
A collection of Singularity images
chrarnold/task_grn_benchmark