Pinned Repositories
aoc2017
My solutions to Advent of Code 2017
cDNA_Cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
gtex-viz
GTEx Visualizations
hoth3
Project for a beginner-friendly hackathon
isotools
IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.
IsoVis
IsoVis enables fast and informative visualization of isoform structures and expression levels.
L1000-notebooks
Summer 2019
sciso-app
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
cjops's Repositories
cjops/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
cjops/aoc2017
My solutions to Advent of Code 2017
cjops/cDNA_Cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
cjops/gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
cjops/gtex-viz
GTEx Visualizations
cjops/hoth3
Project for a beginner-friendly hackathon
cjops/isotools
IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.
cjops/IsoVis
IsoVis enables fast and informative visualization of isoform structures and expression levels.
cjops/L1000-notebooks
Summer 2019
cjops/sciso-app
cjops/scisoseq-portal
cjops/simulator
An undergraduate research project
cjops/seurat
R toolkit for single cell genomics
cjops/SQANTI3
Tool for the Quality Control of Long-Read Defined Transcriptomes
cjops/TALON
Technology agnostic long read analysis pipeline for transcriptomes
cjops/wf-transcriptomes